Author(s): Soham Pawar, Chaitrali Kulkarni, Puja Gadade, Supriya Pujari, Surajkumar Kakade, S.H. Rohane, V.K. Redasani

Email(s): sohamsp105@gmail.com

DOI: 10.52711/2231-5691.2023.00053   

Address: Soham Pawar*, Chaitrali Kulkarni, Puja Gadade, Supriya Pujari, Surajkumar Kakade, S.H. Rohane, V.K. Redasani
Department of Pharmacy, Yashoda Technical Campus, Satara, 415003.
*Corresponding Author

Published In:   Volume - 13,      Issue - 4,     Year - 2023


ABSTRACT:
Molecular docking is a powerful and effective tool in modern era of computer aided drug design. The purpose of ligand-protein docking is to predict the predominant binding mode(s) of a ligand with a protein of known three-dimensional structure. Successful docking methods search high-dimensional spaces effectively and use a scoring function that correctly ranks candidate dockings. Docking can be used to perform virtual screening of wide variety of compounds, rank the results, and propose structural hypotheses of how the ligands inhibit the target, which is invaluable in lead optimization. This review represents the overview of advanced molecular docking using various software. It analyses the various approaches regarding molecular docking like the use of machine learning algorithms in molecular docking, different physicochemical aspects related to ligand-protein complex. These recent improvements in modern technology affect the whole area of healthcare and welfare science.


Cite this article:
Soham Pawar, Chaitrali Kulkarni, Puja Gadade, Supriya Pujari, Surajkumar Kakade, S.H. Rohane, V.K. Redasani. Molecular Docking using different Tools. Asian Journal of Pharmaceutical Research. 2023; 13(4):292-6. doi: 10.52711/2231-5691.2023.00053

Cite(Electronic):
Soham Pawar, Chaitrali Kulkarni, Puja Gadade, Supriya Pujari, Surajkumar Kakade, S.H. Rohane, V.K. Redasani. Molecular Docking using different Tools. Asian Journal of Pharmaceutical Research. 2023; 13(4):292-6. doi: 10.52711/2231-5691.2023.00053   Available on: https://asianjpr.com/AbstractView.aspx?PID=2023-13-4-14


REFERENCES:
1.    Jejurikar BL, Rohane SH. Drug Designing in Discovery Studio. 2021;14(April):135–8.
2.    Aware D, Rohane S. Review Article a Role of Herbal Drug as an Immunity Booster during Covid-19 Pandemic. 2021; 11(3):206–11.
3.    Galande AK, Rohane SH. Insilico Molecular docking analysis in Maestro Software. 2021;14: 97–100.
4.    Patil NS, Rohane SH. Organization of Swiss Dock : In study of Computational and Molecular Docking Study. 2021;14(April):145–8.
5.    Nangare SA, Rohane SH. Review on Guassion, the General Purpose in Computational Chemistry for Medicinal Chemistry. 2021; 14 :89–91.
6.    Satpute UM, Rohane SH. Efficiency of AUTODOCK: Insilico study of Pharmaceutical Drug Molecules. Asian J Res Chem. 2021; 14(1): 1–5.
7.    Rohane SH, Makwana AG. In silico study for the prediction of multiple pharmacological activities of novel hydrazone derivatives. Indian J Chem -Section B. 2019; 58(3): 387–402.
8.    Hemalatha K, Selvin J, Girija K. Synthesis, In silico Molecular Docking Study and Anti-bacterial Evaluation of some Novel 4-Anilino Quinazolines. 2018; 8(3):125–32.
9.    Jadhav R, More K, Khandekar D, Yamgar R, Sawant S. An Efficient Synthesis of Rabeprazole Sodium. 2011;1(1):13–6.
10.    Otuokere IE, Amaku FJ, Alisa CO. In Silico Geometry Optimization, Excited – State Properties of (Belinostat) and its Molecular Docking Studies with Ebola Virus Glycoprotein. 2015; 5(3): 131–7.
11.    Nandhini S, Radha R, Vadivu R. Docking of Hematoporphyrin on Various Anticancer Drugs Targeting Enzymes. 2016; 6(3):123–30.
12.    Akula G, Nirmala R, Reddy SR. Quinazolinones and evaluation of their Anti-inflammatory activity. 2017; 7(2): 60–2.
13.    Bhalerao R, Rishipathak D, Udavant P, Kshirsagar S. Synthesis and Evaluation of Antidiabetic Activity of Few 5- (4- (5-. 2017; 7(4): 261–4.
14.    Kamala G, Srinivasan N, Shankar KR, Suresh R. Synthesis, Characterization and Antimicrobial Evaluation of N-Mannich Bases of (2- Substituted Phenyl) Benzimidazole Derivatives. 2018; 8(2): 87–93.
15.    Shahare H V, Amrutkar RD. Synthesis, Characterization and Antimicrobial Activity of Diphenylamino Isoxazoline Derivatives. 2018; 8(3): 148–50.
16.    Synthesis, Characterization, Anti Microbial, Analgesic activities of 3- (3-Chlorophenyl) -5-Phenyl-4, 5-Dihydro-1, 2-Oxazole Derivatives. 2017; 7(3): 171–4.
17.    Kumar SS, Melchias G, Ravikumar P, Chandrasekar R, Kumaravel P. Bioinspired synthesis of silver nanoparticles using Euphorbia hirta leaf extracts and their antibacterial activity. 2014; 4(1): 39–43.

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